Imperial College London
Portrait Picture

Professor Christl Donnelly CBE FMedSci FRS

Faculty of Medicine, School of Public Health

Visiting Professor
 
 
 
//

Contact

 

c.donnelly Website

 
 
//

Location

 

School of Public HealthWhite City Campus

//

Summary

 

Publications

Citation

BibTex format

@article{Penn:2024:10.1111/2041-210X.14254,
author = {Penn, MJ and Miles, V and Astley, KL and Ham, C and Woodroffe, R and Rowcliffe, M and Donnelly, CA},
doi = {10.1111/2041-210X.14254},
journal = {Methods in Ecology and Evolution},
pages = {91--102},
title = {Sherlock—A flexible, low-resource tool for processing camera-trapping images},
url = {http://dx.doi.org/10.1111/2041-210X.14254},
volume = {15},
year = {2024}
}
Download

RIS format (EndNote, RefMan)

TY  - JOUR
AB  - The use of camera traps to study wildlife has increased markedly in the last two decades. Camera surveys typically produce large data sets which require processing to isolate images containing the species of interest. This is time consuming and costly, particularly if there are many empty images that can result from false triggers. Computer vision technology can assist with data processing, but existing artificial intelligence algorithms are limited by the requirement of a training data set, which itself can be challenging to acquire. Furthermore, deep-learning methods often require powerful hardware and proficient coding skills. We present Sherlock, a novel algorithm that can reduce the time required to process camera trap data by removing a large number of unwanted images. The code is adaptable, simple to use and requires minimal processing power. We tested Sherlock on 240,596 camera trap images collected from 46 cameras placed in a range of habitats on farms in Cornwall, United Kingdom, and set the parameters to find European badgers (Meles meles). The algorithm correctly classified 91.9% of badger images and removed 49.3% of the unwanted ‘empty’ images. When testing model parameters, we found that faster processing times were achieved by reducing both the number of sampled pixels and ‘bouncing’ attempts (the number of paths explored to identify a disturbance), with minimal implications for model sensitivity and specificity. When Sherlock was tested on two sites which contained no livestock in their images, its performance greatly improved and it removed 92.3% of the empty images. Although further refinements may improve its performance, Sherlock is currently an accessible, simple and useful tool for processing camera trap data.
AU  - Penn,MJ
AU  - Miles,V
AU  - Astley,KL
AU  - Ham,C
AU  - Woodroffe,R
AU  - Rowcliffe,M
AU  - Donnelly,CA
DO  - 10.1111/2041-210X.14254
EP  - 102
PY  - 2024///
SP  - 91
TI  - Sherlock—A flexible, low-resource tool for processing camera-trapping images
T2  - Methods in Ecology and Evolution
UR  - http://dx.doi.org/10.1111/2041-210X.14254
VL  - 15
ER  -
Download